non specific hits - EAS

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  1. NCBI Conserved Domain Database (CDD) Help

    https://www.ncbi.nlm.nih.gov/Structure/cdd/cdd_help.shtml

    (NOTE: Non-specific hits are shown only in the full display (illustration) of search results. In contrast, the concise display (illustration) shows only the superfamily to which the top-scoring non-specific hit for a given sequence region belongs.) Superfamily is the domain cluster to which the specific and/or non-specific hits belong. This is a set of conserved domain models that …

  2. How To Use the Conserved Domain Database (CDD): identify ...

    https://www.ncbi.nlm.nih.gov/Structure/cdd/docs/...

    Change to the Full Display if you'd like to see all hits. Four types of hits can be present in search results: specific hits, non-specific hits, the superfamily(ies) to which those hits belong, and multi-domain models. Small triangles, when present, indicate amino acids involved in conserved features/sites, such as catalytic and binding sites.

  3. ncbi 蛋白质比对结果后会有保守域的预测,其中specific hit/non …

    https://qb.zuoyebang.com/xfe-question/question/62...

    以下是英文解释: specific hits meet or exceed a domain-specific e-value threshold (illustrated example) and represent a very high confidence that the query sequence belongs to the same protein family as the sequences use to create the domain model non-specific hits meet or exceed the RPS-BLAST threshold for statistical significance (default E-value cutoff of 0.01,or an E …

  4. ncbi 蛋白质比对结果后会有保守域的预测,其中specific hit/non …

    https://zhidao.baidu.com/question/480490900.html

    25/09/2012 · 照我理解的话,就是说specific hit就是铁定是这个家族的东西了,各种该保守的保守功能就跟这个家族的蛋白功能一样了,可以看做是正房太太的孩子;而non-specific hit就是说跟这个家族中保守区域绝大多数位置氨基酸是一样的,具有统计学意义,但是由于技术原因没有做过这种蛋白的具体功能,所以就是算偏房姨太太的孩子咯。

  5. Systemic Inflammatory Response Syndrome (SIRS ...

    antimicrobe.org/e20.asp

    SIRS is a clinical response to a non-specific insult which may be either infectious or non-infectious in etiology. When evaluating a patient with SIRS, a careful history, physical and laboratory evaluation is critical for identifying the cause and will impact initial therapy.

  6. Mọi người cũng hỏi
    What is a non-specific hit?
    Non-specific hits meet or exceed the RPS-BLAST threshold for statistical significance (default E-value cutoff of 0.01, or an E-value selected by the user with advanced search options). (NOTE: Non-specific hits are shown only in the full display (illustration) of search results.
    www.ncbi.nlm.nih.gov/Structure/cdd/cdd_help.shtml
    What are the different types of hits in a search?
    Four types of hits can be present in search results: specific hits, non-specific hits, the superfamily (ies) to which those hits belong, and multi-domain models. Small triangles, when present, indicate amino acids involved in conserved features/sites, such as catalytic and binding sites.
    www.ncbi.nlm.nih.gov/Structure/cdd/docs/cdd_how_to_pr…
    What is a specific hit in RPS blast?
    the domain specific threshold score (shown as a bit score) that an RPS-BLAST hit must meet or exceed in order to be considered a specific hit, which represents a high confidence association between a protein query sequence and a conserved domain and therefore a high confidence level for the inferred function of the protein query sequence.
    www.ncbi.nlm.nih.gov/Structure/cdd/cdd_help.shtml
    What does it mean when a rash is not specific?
    This means the rash is not specific or characteristic enough to identify the virus that is causing the rash. The doctor cannot say which virus is the culprit, but can say that some virus is a likely cause of the rash.
  7. NCBI中blastx比对蛋白,结果中specific hits和Non-specific hits的 …

    muchong.com/t-6642537-1

    23/10/2012 · 小木虫论坛-学术科研互动平台 » 生物医药区 » 分子生物 » 存档旧帖 » NCBI中blastx比对蛋白,结果中specific hitsNon-specific hits的不同. 1. 1/1. 返回列表. 查看: 0 | 回复: 0. 只看楼主 @他人 存档 新回复提醒 (忽略) 收藏 在APP中查看. 【悬赏金币】回答本帖问题,作者当年华背过身将赠送您 5 个金币.

  8. 如何快速找到某个基因的结构域和保守位点

    https://www.sohu.com/a/216315762_419916

    12/01/2018 · 搜索结果中有四种类型的匹配:特定匹配(specific hits),非特定匹配(non-specific hits),这些匹配所属的超家族(superfamily),以及多结构域(multi-domains)。保守特征/位点的氨基酸用小三角形标识,这些位点可能为催化位点或者结合位点等。具体参见上图中的注解。

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